Ecology LettersPerez-Lamarque, B., Morlon, H. (in press) Characterizing symbiont inheritance during host‐microbiota evolution: application to the great apes gut microbiota Molecular Ecology Resources


 

 

Ecology LettersMaliet, O., Hartig, F., Morlon, H. (2019) A model with many small shifts for estimating species-specific diversification rates Nature Ecology and Evolution 3: 1086-1092


News & Views by Tanja Stadler

 

 

Ecology LettersOnstein, R. E., Kissling W.D., Chatrou, L.W., Couvreur, T.L.P., Morlon, H., Sauquet, H. (2019) Which frugivory-related traits facilitated historical long-distance dispersal in the custard-apple family (Annonaceae)? Journal of Biogeography


 

 

Ecology LettersClavel, J., Aristide, L., Morlon, H. (2019) A Penalized Likelihood Framework for High-Dimensional Phylogenetic Comparative Methods and an Application to New-World Monkeys Brain Evolution Systematic Biology 68: 93-116


R codes available here and here

 

 

Ecology LettersLewitus, E., Bittner, L., Malviya, S., Bowler, C., Morlon, H. (2018) Clade-specific diversification dynamics in marine diatoms since the Jurassic Nature Ecology and Evolution 11:1715


communiqué de presse

 

 

Ecology LettersNogues-Bravo, D., Rodriguez-Sanchez, F., Orisini, L., de Boer, E., Jansson, R., Morlon, H., Fordham, D., Jackson, S.T. (2018) Cracking the code of past biodiversity response to climate change Trends in Ecology and Evolution 30: 765-776


 

 

Ecology LettersDrury, J., Tobias, J.A., Burns, K.J., Mason, N.A., Shultz, A.J., Morlon, H. (2018) Contrasting impacts of competition on ecological and social trait evolution in songbirds PloS Biology 16(1): e2003563

R codes available here
primer by Lauren Richardson

 

 

Ecology LettersBravo, G.A., Antonelli, A., Bacon, C.D., Bartoszek, K., Blom, M.P.K., Huynh, S., Jones, G., Knowles, L. L., Lamichhaney, S., Marcussen, T., Morlon, H., Nakhleh, L.K., Oxelman, B., Pfeil, B., Schliep, A., Wahlberg, N., Werneck, F.P., Wiedenhoeft, J., Willows-Munro, S., Edwards, S.V. (2018) Embracing heterogeneity: Building the Tree of Life and the future of phylogenomics PeerJ Preprints 6 e26449v2


 

 

Ecology LettersLewitus, E., Morlon, H. (2018) Detecting environment-dependent diversification from phylogenies: a simulation study and some empirical illustrations Systematic Biology 67:576-593


R codes available here

 

 

Ecology LettersDrury, J., Grether, G.F., Garland, T., Morlon, H. (2017) An assessment of phylogenetic tools for analyzing the interplay between interspecific interactions and phenotypic evolution Systematic Biology 67:413-427


R codes available here

 

 

Ecology LettersClavel, J., Morlon, H. (2017) Accelerated body-size evolution during cold climatic periods in the Cenozoic Proceedings of the National Academy of Sciences 114: 4183-4188


R codes available here
press release in Physics Today
press release in Arstechnica
communiqué de presse

 

 

Ecology LettersManceau, M., Lambert, A., Morlon, H. (2017) A unifying comparative phylogenetic framework including traits coevolving across interacting lineages Systematic Biology 66: 551-568


R codes available here

 

 

Ecology LettersSanchez-Reyes, L., Morlon, H., Magallon, S. (2017) Uncovering higher-taxon diversification dynamics from clade age and species-richness data Systematic Biology 66: 367-378


 

 

Ecology LettersChazot, N., Willmott, K.R., Condamine, F.L., de-Silva, D.L., Freitas, V.L., Lamas, G., Morlon, H., Giraldo, C.E., Jiggins, C.D., Joron, M., Mallet, J., Uribe, S., Elias, M. (2016) Into the Andes: multiple independent colonizations drive montane diversity in the Neotropical clearwing butterflies Godyridina Molecular Ecology 25: 5765–5784


 

Ecology LettersDrury, J., Clavel, J., Manceau, M., Morlon, H. (2016) Estimating the effect of competition on trait evolution using maximum likelihood inference Systematic Biology 65: 700-710


R codes available here

 

 

Ecology LettersLewitus, E., Morlon, H. (2016) Characterizing and comparing phylogenies from their Laplacian spectrum Systematic Biology 65: 495-507


R codes available here

 

 

Ecology LettersMissa, O., Dytham, C., Morlon, H. (2016) Understanding how biodiversity unfolds through time under neutral theory Philosophical Transaction Royal Society B 371: 20150226


 

 

Ecology LettersMorlon, H., Lewitus, E., Condamine, F.L., Manceau, M., Clavel, J., Drury, J. (2016) RPANDA: an R package for macroevolutionary analyses on phylogenetic trees Methods in Ecology and Evolution 7: 589-597


R codes available here

 

 

Ecology LettersMoen, D.S., Morlon, H., Wiens, J.J. (2016) Testing convergence versus history: convergence dominates phenotypic evolution for over 150 million years in frogs Systematic Biology 65: 146-160


 

 

Ecology LettersRolland, J., Condamine, F.L., Champak, R.B., Jiguet, F., Morlon, H. (2015) Dispersal is a major driver of the latitudinal diversity gradient of Carnivora Global Ecology and Biogeography 24: 1059-1071


 

 

Ecology LettersMouquet, N., Lagadeuc, Y., Devictor, V., Doyen, L., Duputié, A., Eveillard, D., Faure, D., Garnier, E., Gimenez, O., Huneman, H., Jabot, F., Jarne, P., Joly, D., Julliard, J., Kéfi, S., Kergoat, G.J., Lavorel S., Le Gall, L., Morlon, H., Pinay, G., Pradel, R., Schurr, F.M., Thuiller, W., Loreau, M. (2015) Predictive ecology in a changing world Journal of Applied Ecology

communiqué de presse

 

 

Ecology LettersMorlon, H., O'Connor, T., Bryant, J.A., Charkoudian, L.K., Docherty, K.M., Jones, E., Kembel, S., Green, J.L., Bohannan, B.J.M. (2015) The biogeography of putative microbial antibiotic production PloS One 10(6): e0130659

 

 

Ecology LettersManceau, M., Lambert, A., Morlon, H. (2015) Phylogenies support out-of-equilibrium models of biodiversity Ecology Letters 18:347-356


R codes available here

 

 

Ecology LettersCondamine, F., Nagalingum, N.S., Marshall, C.R., Morlon, H. (2015) Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating BMC Evolutionary Biology 15:65


 

 

Ecology Letters Lambert, A., Morlon, H., Etienne, R.S. (2015) The reconstructed tree in the lineage-based model of protracted speciation Journal of Mathematical Biology 70: 367-397


 

 

Ecology Letters Warren, B.H., Simberloff, D., Ricklefs, R.E., Aguilée , R., Condamine, F.L., Gravel, D., Morlon, H., Mouquet, N., Rosindell, J., Casquet, J., Conti, E., Cornuault, J., Fernández-Palacios, J.M., Hengl, T., Norder, S.J., Rijsdijk, K.F., Sanmartín, I., Strasberg, D., Triantis, K., Valente, L.M., Whittaker, R.J., Gillespie, R.G., Emerson, B.C., Thébaud, C. (2014) Islands as model systems in ecology and evolution: prospects fifty years after MacArthur-Wilson Ecology Letters 8: 200–216


Ecology Letters Reyes, E., Morlon, H., Sauquet, H. (2014) Presence in Mediterranean hotspots and floral symmetry affect speciation and extinction rates in Proteaceae New Phytologist 207:401-410


 

 

Ecology Letters Morlon, H., Kefi, S., Martinez, N. (2014) Effects of trophic similarity on community composition Ecology Letters 17: 1495-1506


 

 

Ecology Letters Etienne, R.S., Morlon, H., Lambert, A. (2014) Estimating the duration of speciation from phylogenies Evolution 68(8): 2430-2440


 

 

Ecology Letters Rolland, J., Jiguet, F., Jonsson, K.A., Condamine, F.L., Morlon, H. (2014) Settling down of seasonal migrants promotes bird diversification Proceedings of the Royal Society B 281: 20140473

Evaluated as being of special significance in its field by Ellen Ketterson on Faculty of 1000
communiqué de presse

 

 

Ecology Letters Moen, D., Morlon, H. (2014) Why does diversification slow down? Trends in Ecology and Evolution 29: 190-197


 

 

Ecology Letters Morlon, H. (2014) Phylogenetic approaches for studying diversification Ecology Letters 17: 508-525


R codes available here

 

 

Ecology Letters Condamine, F.L., Rolland, J., Morlon, H. (2013) Macroevolutionary perspectives to environmental change Ecology Letters 16: 72-85


R codes available here

 

 

Ecology Letters Jaunatre, R., Buisson, E., Muller, I., Morlon, H., Mesléard, F., Dutoit, T. (2013) New synthetic indicators to assess community resilience and restoration success Ecological Indicators 29:468-477

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Ecology Letters Morlon, H. (2012) Microbial cooperative warfare Science 337: 1184-1185


 

 

Ecology LettersDornelas, M., Magurran, A., Buckland, S.T., Chao, A., Chazdon, R.L., Colwell, R.K., Curtis, T., Gaston, K.J., Gotelli, N.J., Kosnik, M., McGill, B., McCune, J.L., Morlon, H., Mumby, P.J., Øvreas, L., Studeny, A., Vellend, M. (2012) Quantifying temporal change in biodiversity: challenges and opportunities Proceedings of the Royal Society B 280: 20121931


Ecology Letters Morlon, H., Kemps, B., Plotkin, J.B., Brisson, D. (2012) Explosive radiation of a bacterial species group Evolution 66: 2577–2586


 

Ecology Letters Rolland, J., Cadotte, M.W., Davies, J., Devictor, V., Lavergne, S., Mouquet, N., Pavoine, S., Rodrigues, A., Thuiller, W., Turcati, L., Winter, M., Zupan, L., Jabot, F., Morlon, H. (2011) Using phylogenies in conservation: new perspectives Biology Letters 8: 692-694

 

Ecology Letters Morlon, H., Parsons, T.L., Plotkin, J. (2011) Reconciling molecular phylogenies with the fossil record Proceedings of the National Academy of Sciences 108: 16327-16332

commentary
press release communiqué de presse
R codes available here

 

Ecology LettersMcInnes, L., Baker, W.J., Barraclough, T.G., Dasmahapata, K.K., Goswami, A., Harmon, L.J., Morlon, H., Purvis, A., Rosindell, J., Thomas, G.H., Turvey, S.T., Phillimore, A.B. (2011) Integrating ecology into macroevolutionary research Biology Letters 7: 644-646

 

Ecology Letters Morlon, H., Schwilk, D., Bryant, J., Marquet, P., Rebelo, T., Tauss, C., Bohannan, B. and Green, J. (2011) Spatial patterns of phylogenetic diversity Ecology Letters 14: 141-149

Recommended by Jordi Bascompte on Faculty of 1000
press release

 

Ecology Letters Morlon, H., Potts, M. and Plotkin, J. (2010) Inferring the dynamics of diversification: a coalescent approach PloS Biology 8(9): e1000493

Evaluated as “Must Read” by Katia Koelle on Faculty of 1000
press release

R codes available here

Ecology LettersKembel, S.W., Cowan, P., Helmus, M. R., Cornwell, W., Morlon, H., Ackerly, D., Blomberg, S. P., Webb, C. O. (2010) Picante: R tools for integrating phylogenies and ecology Bioinformatics 26 : 1463-1464

 

Ecology Letters Morlon, H., White, E. P., Etienne, R. S., Green, J. L., Ostling, A., Alonso, D., Enquist, B. J., He, F., Hurlbert, A., Magurran, A. E., Maurer, B. A., McGill, B. J., Olff, H., Storch, D., Zillio, T. (2009) Taking species abundance distributions beyond individuals Ecology Letters 12 : 488-501

 

Ecology LettersBryant, J., Lamanna, C., Morlon, H., Enquist, B., Green, J. (2008) Microbes on mountainsides: Contrasting elevational patterns of bacterial and plant diversity Proceedings of the National Academy of Sciences 105 : S1505-S1511

press release

 

Ecology Letters Morlon, H., Chuyong, G., Condit, R., Hubbell, S., Kenfack, D., Thomas, D., Valencia, R., Green, J. (2008) A general framework for the distance-decay of similarity in ecological communities Ecology Letters 11 : 904-917

 

Ecology Letters Morlon, H., Fortin, C., Adam, C., Garnier-Laplace, J. (2006) Selenite transport and its inhibition in the unicellular green alga Chlamydomonas reinhardtii Environmental Toxicology and Chemistry 5 : 1408-17

 

Ecology Letters Morlon, H., Fortin, C., Floriani, M., Boudou, A., Garnier-Laplace, J. (2005). Toxicity of selenite in the unicellular green alga Chlamydomonas reinhardtii: comparison between effects at the population and subcellular level Aquatic toxicology, 73 : 65-78

 

Ecology Letters Morlon, H., Fortin, C., Adam, C., Garnier-Laplace, J. (2005). Establishing links between toxicity and bioaccumulation of selenite in the unicellular green alga Chlamydomonas reinhardtii Radioprotection, 40. S101-S106

 

Ecology Letters Alvarado, S., Baraloto, C., Bremond, L., Bretagnolle, F., Buisson, E., Caillon, S., Claudet, J., Dounias, E., Elias, M., Favier, C., Fontaine, C., Forget, P.M., Garine-Wichatitsky, E., Hossaert-McKey, M., Mavingui, P., McKey, D., Morlon, H., Murienne, J., Poncy, O., Prugnolle, F. (2015) Écologie tropicale: de l'ombre à la lumière. Edition cherche midi


 

Ecology Letters Morlon, H. (2014) Understanding how biodiversity is distributed in space and time Formal Methods in Macro-Biology Lecture Notes in Computer Science Volume 8738, pp 36-39